R4RNA: An R package for RNA visualization and analysis

A package for RNA basepair analysis, including the visualization of basepairs as arc diagrams for easy comparison and annotation of sequence and structure. Arc diagrams can additionally be projected onto multiple sequence alignments to assess basepair conservation and covariation, with numerical methods for computing statistics for each.

Package details

AuthorDaniel Lai, Irmtraud Meyer <irmtraud.meyer@cantab.net>
Bioconductor views Alignment DataImport DataRepresentation MultipleComparison MultipleSequenceAlignment Preprocessing Visualization
MaintainerDaniel Lai <jujubix@cs.ubc.ca>
URL http://www.e-rna.org/r-chie/
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))


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R4RNA documentation built on Nov. 8, 2020, 5:15 p.m.