writeHelix: Write out a helix data frame into a text file
In R4RNA: An R package for RNA visualization and analysis

Description Usage Arguments Value Author(s) Examples

Write out a helix data frame into a text file into the four-column tab-delimited format with proper header and column names.

1	writeHelix(helix, file = stdout())

`helix`	A helix data frame.
`file`	A character string pointing to a file path, or a file connection. Defaults to the console.

No value returned, will write to STDOUT or specific file location.

Daniel Lai

    # Create helix data frame
    helix <- data.frame(2, 8, 3, 0.5)
    helix[2, ] <- c(5, 15, 4, -0.5)
    helix <- as.helix(helix)

    writeHelix(helix)

Loading required package: Biostrings
Loading required package: BiocGenerics
Loading required package: parallel

Attaching package: ‘BiocGenerics’

The following objects are masked from ‘package:parallel’:

    clusterApply, clusterApplyLB, clusterCall, clusterEvalQ,
    clusterExport, clusterMap, parApply, parCapply, parLapply,
    parLapplyLB, parRapply, parSapply, parSapplyLB

The following objects are masked from ‘package:stats’:

    IQR, mad, sd, var, xtabs

The following objects are masked from ‘package:base’:

    anyDuplicated, append, as.data.frame, basename, cbind, colnames,
    dirname, do.call, duplicated, eval, evalq, Filter, Find, get, grep,
    grepl, intersect, is.unsorted, lapply, Map, mapply, match, mget,
    order, paste, pmax, pmax.int, pmin, pmin.int, Position, rank,
    rbind, Reduce, rownames, sapply, setdiff, sort, table, tapply,
    union, unique, unsplit, which.max, which.min

Loading required package: S4Vectors
Loading required package: stats4

Attaching package: ‘S4Vectors’

The following object is masked from ‘package:base’:

    expand.grid

Loading required package: IRanges
Loading required package: XVector

Attaching package: ‘Biostrings’

The following object is masked from ‘package:base’:

    strsplit

# 15
i	j	length	value
sh: 1: rm: Permission denied
2	8	3	0.5
5	15	4	-0.5