Description Usage Arguments Details Value Author(s) References See Also Examples

Compute betweenness centrality for an undirected graph

1 |

`g` |
an instance of the |

`Brandes.betweenness.centrality`

computes the betweenness centrality of
each vertex or each edge in the graph, using an algorithm by U. Brandes.

Betweenness centrality of a vertex `v`

is calculated as follows:
`N_st(v)`

= no. of shortest paths from `s`

to `t`

that pass through `v`

,
`N_st`

= no. of shortest paths from `s`

to `t`

,
betweenness centrality of `v`

= `sum(N_st(v)/N_st)`

for all vertices `s`

!= `v`

!= `t`

.

Betweenness centrality of an edge is calculated similarly.

The relative betweenness centrality for a vertex is to scale the betweenness
centrality of the given vertex by `2/(n**2 - 3n + 2)`

where `n`

is
the no. of vertices in the graph.

Central point dominance measures the maximum betweenness of any vertex in the graph.

See documentation on brandes betweenness centrality in Boost Graph Library for more details.

A list of

`betweenness.centrality.vertices` |
betweenness centrality of each vertex |

`betweenness.centrality.edges` |
betweenness centrality of each edge |

`relative.betweenness.centrality.vertices` |
relative betweenness centrality of each vertex |

`dominance` |
maximum betweenness of any point in the graph |

Li Long <li.long@isb-sib.ch>

Boost Graph Library ( www.boost.org/libs/graph/doc/index.html )

The Boost Graph Library: User Guide and Reference Manual; by Jeremy G. Siek, Lie-Quan Lee, and Andrew Lumsdaine; (Addison-Wesley, Pearson Education Inc., 2002), xxiv+321pp. ISBN 0-201-72914-8

`betweenness.centrality.clustering`

1 2 3 4 5 | ```
con <- file(system.file("XML/conn.gxl",package="RBGL"), open="r")
coex <- fromGXL(con)
close(con)
coex <- ugraph(coex)
brandes.betweenness.centrality(coex)
``` |

```
Loading required package: graph
Loading required package: BiocGenerics
Loading required package: parallel
Attaching package: 'BiocGenerics'
The following objects are masked from 'package:parallel':
clusterApply, clusterApplyLB, clusterCall, clusterEvalQ,
clusterExport, clusterMap, parApply, parCapply, parLapply,
parLapplyLB, parRapply, parSapply, parSapplyLB
The following objects are masked from 'package:stats':
IQR, mad, xtabs
The following objects are masked from 'package:base':
Filter, Find, Map, Position, Reduce, anyDuplicated, append,
as.data.frame, cbind, colnames, do.call, duplicated, eval, evalq,
get, grep, grepl, intersect, is.unsorted, lapply, lengths, mapply,
match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, rank,
rbind, rownames, sapply, setdiff, sort, table, tapply, union,
unique, unsplit, which, which.max, which.min
$betweenness.centrality.vertices
A B C D E H F G
[1,] 0 0 0 12 4 4 0 0
$edges
[,1] [,2] [,3] [,4] [,5] [,6] [,7] [,8] [,9] [,10] [,11] [,12] [,13] [,14]
[1,] "A" "A" "A" "B" "B" "C" "D" "D" "E" "E" "E" "H" "H" "F"
[2,] "B" "C" "D" "C" "D" "D" "E" "H" "G" "H" "F" "F" "G" "G"
$betweenness.centrality.edges
[,1] [,2] [,3] [,4] [,5] [,6] [,7] [,8] [,9] [,10] [,11] [,12] [,13]
centrality 1 1 5 1 5 5 8 8 3 1 3 3 3
[,14]
centrality 1
$relative.betweenness.centrality.vertices
A B C D E H F G
[1,] 0 0 0 0.5714286 0.1904762 0.1904762 0 0
$dominance
[1] 0.5170068
```

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