RIPAT: Retroviral Integration Pattern Analysis Tool (RIPAT)

RIPAT is developed as an R package for retroviral integration sites annotation and distribution analysis. RIPAT needs local alignment results from BLAST and BLAT. Specific input format is depicted in RIPAT manual. RIPAT provides RV integration pattern analysis result as forms of R objects, excel file with multiple sheets and plots.

Package details

AuthorMin-Jeong Baek [aut, cre]
Bioconductor views Annotation
MaintainerMin-Jeong Baek <>
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))


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RIPAT documentation built on Nov. 8, 2020, 6:24 p.m.