getStudiesWithSpecificAssayData: Get a list of studies that have specific assay type data

In RImmPort: RImmPort: Enabling Ready-for-analysis Immunology Research Data

Description

Get a list of studies that have specific assay type data

Usage

getStudiesWithSpecificAssayData(assay_type, all_study_ids = c("ALL"))

Arguments

assay_type	Assay Type
all_study_ids	List of study indentifiers to search on

Value

List of study indentifiers

Examples

library(DBI)
library(sqldf)
studies_dir <- system.file("extdata", "ImmPortStudies", package = "RImmPort")
db_dir <- file.path(studies_dir, "Db")
sqlite_conn <- dbConnect(SQLite(), dbname=file.path(db_dir, "ImmPort.sqlite"))
setImmPortDataSource(sqlite_conn)
study_ids <- getStudiesWithSpecificAssayData("ELISPOT")

RImmPort documentation built on Nov. 8, 2020, 5:54 p.m.