CheckToolAll: CheckToolAll
In RNASeqR: RNASeqR: an R package for automated two-group RNA-Seq analysis workflow

Check whether 'Hisat2', 'Stringtie' and 'Gffcompare' are installed on the workstation

1	CheckToolAll(path.prefix, print = TRUE)

`path.prefix`	path prefix of 'gene_data/', 'RNASeq_bin/', 'RNASeq_results/', 'Rscript/' and 'Rscript_out/' directories.
`print`	If `TRUE`, detailed information will be printed. If `FALSE`, detailed information will not be printed.

None

data(yeast)
## Not run: 
CheckToolAll(yeast@path.prefix,
             print=TRUE)
## End(Not run)

RNASeqR documentation built on Nov. 8, 2020, 7:49 p.m.

RNASeqR index

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