SequenceDataList-class: The SequenceDataList class
In RNAmodR: Detection of post-transcriptional modifications in high throughput sequencing data
Description
Usage
Arguments
Value
Examples
Description
The SequenceDataList class is used to hold SequenceData or
SequenceDataSet objects as its elements. It is derived from the
List class.
The SequenceDataList is used to hold data from different sets of
aligned reads. This allows multiple methods to be aggregated into one
modification detection strategy. Annotation and sequence data must be the
same for all elements, however the bam files can be different.
Usage
1
Arguments
...
The elements to be included in the SequenceDataList.
Value
a SequenceDataList
Examples
1
2
3
data(psd,package="RNAmodR")
data(e5sd,package="RNAmodR")
sdl <- SequenceDataList(SequenceDataSet(psd,e5sd),e5sd)
RNAmodR documentation built on Dec. 15, 2020, 2 a.m.
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Description Usage Arguments Value Examples
Description
The SequenceDataList class is used to hold SequenceData or
SequenceDataSet objects as its elements. It is derived from the
List class.
The SequenceDataList is used to hold data from different sets of
aligned reads. This allows multiple methods to be aggregated into one
modification detection strategy. Annotation and sequence data must be the
same for all elements, however the bam files can be different.
Usage
1 |
Arguments
... |
The elements to be included in the |
Value
a SequenceDataList
Examples
1 2 3 | data(psd,package="RNAmodR")
data(e5sd,package="RNAmodR")
sdl <- SequenceDataList(SequenceDataSet(psd,e5sd),e5sd)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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