RSVSim is a package for the simulation of deletions, insertions, inversion, tandem-duplications and translocations of various sizes in any genome available as FASTA-file or BSgenome data package. SV breakpoints can be placed uniformly accross the whole genome, with a bias towards repeat regions and regions of high homology (for hg19) or at user-supplied coordinates.
|Date of publication||None|
|Maintainer||Christoph Bartenhagen <email@example.com>|
compareSVs: Compare the simulation with a set of SVs
estimateSVSizes: Draw random structural variation sizes from a beta...
segmentalDuplications: Segmental duplications
simulateSV: Structural Variant Simulation
weightsMechanisms: Weights for SV formation mechanisms
weightsRepeats: Weights for repeat region bias