multipleVariantPValue_R_Backend: R backend for multipleVariantPValue calculation

In RVS: Computes estimates of the probability of related individuals sharing a rare variant

Description

R backend for multipleVariantPValue calculation

Usage

multipleVariantPValue_R_Backend(
  snpMat,
  famIds,
  sharingProbs,
  minorAllele,
  filter = NULL,
  alpha = 0
)

Arguments

snpMat	SnpMatrix
famIds	family ids corresponding to rows of the snpMap
sharingProbs	vector of sharing probabilites, must be a named vector with famid's for each probability
minorAllele	vector specifying the minor allele of each variant
filter	criteria for filtering pvalues
alpha	parameter for filter

Value

list of p-values and potential p-values

RVS documentation built on Nov. 8, 2020, 6:57 p.m.