Rariant-package: Rariant package
In Rariant: Identification and Assessment of Single Nucleotide Variants through Shifts in Non-Consensus Base Call Frequencies
Description
Author(s)
See Also
Examples
Description
The 'Rariant' package offers the framework to identify and
characterize shifts of variant frequencies in a comparative setting
from high-throughput short-read sequencing data. It estimates shifts
in the non-consensus variant frequency and provides confidence
estimates that allow for a quantitative assessment of presence or
absence of variants. The vignette accompanying the package gives a
detailed explanation and outlines a typical workflow on real data.
Author(s)
Julian Gehring, Simon Anders, Bernd Klaus (EMBL Heidelberg)
Maintainer: Julian Gehring <julian.gehring@embl.de>
See Also
rariant
vignette(package = "Rariant")
Examples
1
2
3
Rariant documentation built on Nov. 8, 2020, 6:56 p.m.
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Description Author(s) See Also Examples
Description
The 'Rariant' package offers the framework to identify and characterize shifts of variant frequencies in a comparative setting from high-throughput short-read sequencing data. It estimates shifts in the non-consensus variant frequency and provides confidence estimates that allow for a quantitative assessment of presence or absence of variants. The vignette accompanying the package gives a detailed explanation and outlines a typical workflow on real data.
Author(s)
Julian Gehring, Simon Anders, Bernd Klaus (EMBL Heidelberg)
Maintainer: Julian Gehring <julian.gehring@embl.de>
See Also
rariant
vignette(package = "Rariant")
Examples
1 2 3 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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