API for RiboProfiling
Ribosome Profiling Data Analysis: from BAM to Data Representation and Interpretation
| Global functions | |
|---|---|
| RiboProfiling | Man page |
| RiboProfiling-package | Man page |
| applyShiftFeature | Source code |
| aroundPromoter | Man page Source code |
| cdsPosTransc | Man page |
| codonDataCtrl | Man page |
| codonIndexCovCtrl | Man page |
| codonInfo | Man page Source code |
| codonPCA | Man page Source code |
| countShiftReads | Man page Source code |
| countsPlot | Man page Source code |
| ctrlGAlignments | Man page |
| funcBoxplot | Source code |
| funcDataFrameGGPlot2 | Source code |
| funcPlotPairs | Source code |
| getCodons | Source code |
| getSummarizedCov | Source code |
| histMatchLength | Man page Source code |
| makePairs | Source code |
| naTozeroRle | Source code |
| normRange | Source code |
| orfRelativePos | Man page Source code |
| plotSummarizedCov | Man page Source code |
| printPCA | Man page Source code |
| readStartCov | Man page Source code |
| readStartCov1Aln | Source code |
| readsToStartOrEnd | Man page Source code |
| redefineStartEnd | Source code |
| riboSeqFromBAM | Man page Source code |
