getFitModel-methods: Extract fit data from 'Rnits' object
In Rnits: R Normalization and Inference of Time Series data

Description Usage Arguments Details Value Examples

Retrieve model fit data from Rnits object after fit has been run.

getFitModel(object)

## S4 method for signature 'Rnits'
getFitModel(object)

object

Rnits

Contains Ratio statistic, p-value and cluster ID data

A data frame containing the model fit results for all genes

# load pre-compiled expressionSet object for Ronen and Botstein yeast  chemostat data
data(yeastchemostat)
rnitsobj = build.Rnits(yeastchemostat, logscale = TRUE, normmethod = 'Between')
## Not run: 
# Fit model using gene-level summarization
rnitsobj <- fit(rnitsobj, gene.level = TRUE, clusterallsamples = FALSE)

# P-values, ratio statistics and cluster ID's can be retrieved for all genes together
fitdata <- getFitModel(rnitsobj)

## End(Not run)