test_testPairedEndBam.R
In Rsamtools: Binary alignment (BAM), FASTA, variant call (BCF), and tabix file import

fl <- system.file("extdata", "ex1.bam", package="Rsamtools")

test_testPairedEndBam <- function() {
    checkTrue(testPairedEndBam(BamFile(fl)))
    checkTrue(testPairedEndBam(fl))
}

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Rsamtools documentation built on Nov. 8, 2020, 8:11 p.m.

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Rsamtools
Binary alignment (BAM), FASTA, variant call (BCF), and tabix file import

inst/unitTests/test_testPairedEndBam.R
In Rsamtools: Binary alignment (BAM), FASTA, variant call (BCF), and tabix file import

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Rsamtools Binary alignment (BAM), FASTA, variant call (BCF), and tabix file import

inst/unitTests/test_testPairedEndBam.R In Rsamtools: Binary alignment (BAM), FASTA, variant call (BCF), and tabix file import

Try the Rsamtools package in your browser

R Package Documentation

Browse R Packages

We want your feedback!

Rsamtools
Binary alignment (BAM), FASTA, variant call (BCF), and tabix file import

inst/unitTests/test_testPairedEndBam.R
In Rsamtools: Binary alignment (BAM), FASTA, variant call (BCF), and tabix file import