Files in Rtreemix

Rtreemix: Mutagenetic trees mixture models.

NAMESPACE

DESCRIPTION

build/vignette.rds

src/Rtreemix_patch.cc

src/WrapGraph.cc

src/mtree.cc

src/Makevars.win

src/max_weight_branch.cc

src/mtreemix.cc

src/cfunctions.cc

src/Makevars

src/replaceleda.cc

src/kmeans.cc

src/Rtreemix.cc

src/include/kmeans.h

src/include/Set.hh

src/include/replaceleda.hh

src/include/mtreemix.h

src/include/mtree.h

src/include/List.hh

src/include/Map.hh

src/include/Graph.hh

src/include/Queue.hh

src/include/NodeN.hh

src/include/Edge.hh

src/include/RefCounted.hh

src/include/max_weight_branch.h

src/include/Node.hh

src/include/Edge_Array.hh

src/include/Rtreemix_patch.h

src/include/WrapGraph.hh

src/include/cfunctions.h

src/include/Array.hh

src/include/Matrix.hh

src/include/Vector.hh

src/include/Node_Array.hh

data/hiv.data.RData

R/ClassMethods.R R/RtreemixMethods.R R/zzz.R R/StabilityFunctions.R R/AllClasses.R vignettes/topologies.pdf vignettes/ExtendedVignette.pdf

vignettes/treemix.pat

vignettes/Rtreemix.bib

vignettes/Rtreemix.Rnw

vignettes/ClassDiagram.pdf man/fit-methods.Rd man/bootstrap-methods.Rd man/RtreemixData-class.Rd man/hiv.data.Rd man/L2.norm.Rd man/comp.models.Rd man/Pval.dist.Rd man/RtreemixStats-class.Rd man/kullback.leibler.Rd man/comp.trees.Rd man/get.tree.levels.Rd man/RtreemixGPS-class.Rd man/RtreemixSim-class.Rd man/sim-methods.Rd man/confIntGPS-methods.Rd man/distribution-methods.Rd man/RtreemixModel-class.Rd man/generate-methods.Rd man/stability.sim.Rd man/L1.dist.Rd man/gps-methods.Rd man/likelihoods-methods.Rd inst/doc/Rtreemix.R inst/doc/Rtreemix.pdf

inst/doc/Rtreemix.Rnw

inst/examples/script.R

inst/examples/treemix.pat

Rtreemix documentation built on Nov. 8, 2020, 5:57 p.m.