patternsummary: patternsummary

Description Usage Arguments Details Value Author(s) Examples

View source: R/patternsummary.R

Description

Count table for pattern

Usage

1
patternsummary(pattern)

Arguments

pattern

The direct output of truetimepattern or pseudotimepattern function.

Details

This function generates a count table of number of genes with each pattern.

Value

A data.frame object. First column: pattern; Second column: number of genes

Author(s)

Zhicheng Ji, Hongkai Ji <zji4@zji4.edu>

Examples

1
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3
data(HSMMdata)
pattern <- truetimepattern(HSMMdata,truetime,removeconstant=TRUE)
patternsummary(pattern)

SEPA documentation built on May 20, 2017, 10:02 p.m.

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