Man pages for SEPIRA
Systems EPigenomics Inference of Regulatory Activity

ComputePCORCompute partial correlation coefficient
GeneExpRNA-seq data matrix from GTEx
InferTFactEstimate TF activity score in a sample
InferTFactPRLEstimate TF activity score in different samples
LimmaFnDo differential gene expression/ differential DNA methylation...
LUSCexpLUSC RNA-seq dataset
LUSCmethLUSC DNA methylation dataset
sepiraInfNetInfer tissue-specific regulatory network from gene expression...
sepiraRegActInfer TF activity from gene expression/ DNA methylation...
TFeidTranscription factor genes annotated using Entrez gene ID
VALexpRNA-seq data matrix from ProteinAtlas project
SEPIRA documentation built on Nov. 1, 2018, 3:41 a.m.