sampleAnnotation.txt: Sample annotation file for the example data used in vignette.
In SeqSQC: A bioconductor package for sample quality check with next generation sequencing data
Description
This sample annotation file is a required input from the user when
using SeqSQC. It includes the sample info with sample name stored
in the column of sample, the population info stored in the
column of population, and the gender info stored in the
column of gender. The population column must be a in
the format of "AFR/EUR/ASN/EAS/SAS". The gender column must
be in the format of "female/male". This file is meant to be used
together with the example_sub.vcf as a runnable example in
the function of LoadVfile and sampleQC in the
vignette.
Author(s)
Qian Liu qliu7@buffalo.edu
SeqSQC documentation built on Nov. 8, 2020, 5:03 p.m.
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Description
This sample annotation file is a required input from the user when
using SeqSQC. It includes the sample info with sample name stored
in the column of sample, the population info stored in the
column of population, and the gender info stored in the
column of gender. The population column must be a in
the format of "AFR/EUR/ASN/EAS/SAS". The gender column must
be in the format of "female/male". This file is meant to be used
together with the example_sub.vcf as a runnable example in
the function of LoadVfile and sampleQC in the
vignette.
Author(s)
Qian Liu qliu7@buffalo.edu
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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