SeqVarTools-package: Tools for Variant Analysis
In SeqVarTools: Tools for variant data
Description
This package provides tools for data exploration and analysis of
variants, extending the functionality of the package
SeqArray.
Details
SeqArray provides an alternative to the Variant Call
Format (VCF) for storage of variants called from sequencing data,
enabling efficient storage, fast access to subsets of the data, and
rapid computation.
SeqVarTools provides an interface to the SeqArray storage
format with tools for many common tasks in variant analysis and
integration with basic S4 classes in Bioconductor.
Author(s)
Stephanie M. Gogarten, Xiuwen Zheng
Maintainer: Stephanie M. Gogarten sdmorris@u.washington.edu
SeqVarTools documentation built on Nov. 22, 2020, 2 a.m.
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Description
This package provides tools for data exploration and analysis of variants, extending the functionality of the package SeqArray.
Details
SeqArray provides an alternative to the Variant Call Format (VCF) for storage of variants called from sequencing data, enabling efficient storage, fast access to subsets of the data, and rapid computation.
SeqVarTools provides an interface to the SeqArray storage format with tools for many common tasks in variant analysis and integration with basic S4 classes in Bioconductor.
Author(s)
Stephanie M. Gogarten, Xiuwen Zheng
Maintainer: Stephanie M. Gogarten sdmorris@u.washington.edu
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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