Files in SigsPack

Mutational Signature Estimation for Single Samples

README.md

NEWS

NAMESPACE

DESCRIPTION

build/vignette.rds

data/hg19context_freq.RData

data/sigProfilerExome.RData

data/sigProfiler20190522.RData

data/cosmicSigs.RData

R/vcf2mut_cat.R R/signature_exposure.R R/cosmicSigs.R R/decomposeQP.R R/sigProfiler20190522.R R/normalize.R R/create_mut_catalogues.R R/bootstrap_mut_catalogues.R R/plot_bootstrapped_exposure.R R/sigProfilerExome.R R/hg19context_freq.R R/get_context_freq.R R/summarize_exposures.R vignettes/SigsPack.Rmd man/normalize.Rd man/get_context_freq.Rd man/decomposeQP.Rd man/summarize_exposures.Rd man/sigProfilerExome.Rd man/bootstrap_mut_catalogues.Rd man/cosmicSigs.Rd man/sigProfiler20190522.Rd man/vcf2mut_cat.Rd man/hg19context_freq.Rd man/signature_exposure.Rd man/create_mut_catalogues.Rd man/plot_bootstrapped_exposure.Rd inst/supp_tables.R inst/doc/SigsPack.R inst/doc/SigsPack.Rmd

inst/doc/SigsPack.html

inst/extdata/COSMICSigs.txt

inst/extdata/sigProfiler_SBS_signatures_2019_05_22.csv

inst/extdata/example.bed.gz

inst/extdata/sigProfiler_exome_SBS_signatures.csv

inst/extdata/example.vcf.gz

SigsPack documentation built on Nov. 8, 2020, 6:57 p.m.