bootstrap_mut_catalogues | Bootstraps a given mutational catalogue |
cosmicSigs | COSMIC Signature Profiles |
create_mut_catalogues | Creates simulated mutational catalogues |
decomposeQP | decomposeQP function |
get_context_freq | Extract occurence of tri-nucleotide contexts |
hg19context_freq | Trinuecleotide frequencies of the human reference genome hg19 |
normalize | Normalize mutational catalogues |
plot_bootstrapped_exposure | Plot signature exposure estimation for several samples |
signature_exposure | Estimates the signature exposure of a mutational catalogue |
sigProfiler20190522 | COSMIC v3 whole genome SBS Signature Profiles |
sigProfilerExome | COSMIC v3 exome SBS Signature Profiles |
summarize_exposures | Signature exposure analysis of a mutational catalogue |
vcf2mut_cat | Derive the mutational catalogue from a vcf |
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