TCGAprimaryTumors: Select primary tumors from TCGA datasets
In TCGAutils: TCGA utility functions for data management
Description
Usage
Arguments
Value
Examples
View source: R/TCGAprimaryTumors.R
Description
Tumor selection is decided using the ‘sampleTypes' data. For ’LAML' datasets,
the primary tumor code used is "03" otherwise, "01" is used.
Usage
1
TCGAprimaryTumors(multiassayexperiment)
Arguments
multiassayexperiment
A MultiAssayExperiment with TCGA
data as obtained from curatedTCGAData
Value
A MultiAssayExperiment containing only primary tumor samples
Examples
1
2
3
TCGAutils documentation built on April 17, 2021, 6:04 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value Examples
View source: R/TCGAprimaryTumors.R
Description
Tumor selection is decided using the ‘sampleTypes' data. For ’LAML' datasets, the primary tumor code used is "03" otherwise, "01" is used.
Usage
1 | TCGAprimaryTumors(multiassayexperiment)
|
Arguments
multiassayexperiment |
A MultiAssayExperiment with TCGA
data as obtained from |
Value
A MultiAssayExperiment containing only primary tumor samples
Examples
1 2 3 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.