base_dense_w_10: Contains an output of the dense_zones function.
In TFHAZ: Transcription Factor High Accumulation Zones
Description
Usage
Format
Value
Examples
Description
base_dense_w_10 is a list of 8 elements (zones,
zones_count, bases_count, lengths, distances,
acctype, chr, w). It is the output of dense_zones
function (with threshold_step=21 in order to have 14 threshold values)
applied to the accumulation vector found with w=10, chr="all", acctype="base".
base_dense_w_10 is included in the data_man collection.
Usage
1
data("data_man")
Format
An object of class list.
Value
None, the function is invoked for its side effect.
Examples
1
2
3
4
# loading data
data("data_man")
# base_dense_w_10 is in the data_man collection of datasets
head(base_dense_w_10)
TFHAZ documentation built on Nov. 8, 2020, 5:05 p.m.
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Description Usage Format Value Examples
Description
base_dense_w_10 is a list of 8 elements (zones, zones_count, bases_count, lengths, distances, acctype, chr, w). It is the output of dense_zones function (with threshold_step=21 in order to have 14 threshold values) applied to the accumulation vector found with w=10, chr="all", acctype="base". base_dense_w_10 is included in the data_man collection.
Usage
1 | data("data_man")
|
Format
An object of class list.
Value
None, the function is invoked for its side effect.
Examples
1 2 3 4 | # loading data
data("data_man")
# base_dense_w_10 is in the data_man collection of datasets
head(base_dense_w_10)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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