| .BayesSpikeSolver |
Man page
|
| .CandidateFilter |
Man page
|
| .EnsembleSolver |
Man page
|
| .FootprintFilter |
Man page
|
| .FootprintFinder |
Man page
|
| .LassoPVSolver |
Man page
|
| .LassoSolver |
Man page
|
| .NullFilter |
Man page
|
| .PearsonSolver |
Man page
|
| .RandomForestSolver |
Man page
|
| .RidgeSolver |
Man page
|
| .Solver |
Man page
|
| .SpearmanSolver |
Man page
|
| .SqrtLassoSolver |
Man page
|
| .TReNA |
Man page
|
| .VarianceFilter |
Man page
|
| BayesSpikeSolver |
Man page
Source code
|
| BayesSpikeSolver-class |
Man page
|
| CandidateFilter |
Man page
Man page
Source code
|
| CandidateFilter-class |
Man page
|
| EnsembleSolver |
Man page
Source code
|
| EnsembleSolver-class |
Man page
|
| FootprintFilter |
Man page
Man page
Source code
|
| FootprintFilter-class |
Man page
|
| FootprintFinder |
Man page
Man page
Source code
|
| FootprintFinder-class |
Man page
Man page
|
| LassoPVSolver |
Man page
Source code
|
| LassoPVSolver-class |
Man page
|
| LassoSolver |
Man page
Source code
|
| LassoSolver-class |
Man page
|
| NullFilter |
Man page
Man page
Source code
|
| NullFilter-class |
Man page
|
| PearsonSolver |
Man page
Source code
|
| PearsonSolver-class |
Man page
|
| RandomForestSolver |
Man page
Source code
|
| RandomForestSolver-class |
Man page
|
| RidgeSolver |
Man page
Source code
|
| RidgeSolver-class |
Man page
|
| Solver |
Man page
Man page
Source code
|
| Solver-class |
Man page
|
| SpearmanSolver |
Man page
Source code
|
| SpearmanSolver-class |
Man page
|
| SqrtLassoSolver |
Man page
Source code
|
| SqrtLassoSolver-class |
Man page
|
| TReNA |
Man page
Man page
Source code
|
| TReNA-class |
Man page
Man page
|
| TReNA-package |
Man page
|
| VarianceFilter |
Man page
Man page
Source code
|
| VarianceFilter-class |
Man page
|
| closeDatabaseConnections |
Man page
|
| closeDatabaseConnections,FootprintFinder-method |
Man page
|
| elasticNetSolver |
Source code
|
| getAssayData |
Man page
|
| getAssayData,Solver-method |
Man page
|
| getCandidates |
Man page
|
| getCandidates,FootprintFilter-method |
Man page
|
| getCandidates,NullFilter-method |
Man page
|
| getCandidates,VarianceFilter-method |
Man page
|
| getCandidates-FootprintFilter |
Man page
|
| getCandidates-NullFilter |
Man page
|
| getCandidates-VarianceFilter |
Man page
|
| getChromLoc |
Man page
|
| getChromLoc,FootprintFinder-method |
Man page
|
| getFilterAssayData |
Man page
|
| getFilterAssayData,CandidateFilter-method |
Man page
|
| getFootprintsForGene |
Man page
|
| getFootprintsForGene,FootprintFinder-method |
Man page
|
| getFootprintsInRegion |
Man page
|
| getFootprintsInRegion,FootprintFinder-method |
Man page
|
| getGenePromoterRegion |
Man page
|
| getGenePromoterRegion,FootprintFinder-method |
Man page
|
| getGtfGeneBioTypes |
Man page
|
| getGtfGeneBioTypes,FootprintFinder-method |
Man page
|
| getGtfMoleculeTypes |
Man page
|
| getGtfMoleculeTypes,FootprintFinder-method |
Man page
|
| getPromoterRegionsAllGenes |
Man page
|
| getPromoterRegionsAllGenes,FootprintFinder-method |
Man page
|
| getSolverName |
Man page
|
| getSolverName,TReNA-method |
Man page
|
| getSolverObject |
Man page
|
| getSolverObject,TReNA-method |
Man page
|
| mapMotifsToTFsMergeIntoTable |
Man page
|
| mapMotifsToTFsMergeIntoTable,FootprintFinder-method |
Man page
|
| parseDatabaseUri |
Source code
|
| printf |
Source code
Source code
Source code
Source code
Source code
Source code
Source code
|
| rescalePredictorWeights |
Man page
|
| rescalePredictorWeights,Solver-method |
Man page
|
| run,BayesSpikeSolver-method |
Man page
|
| run,EnsembleSolver-method |
Man page
|
| run,LassoPVSolver-method |
Man page
|
| run,LassoSolver-method |
Man page
|
| run,PearsonSolver-method |
Man page
|
| run,RandomForestSolver-method |
Man page
|
| run,RidgeSolver-method |
Man page
|
| run,SpearmanSolver-method |
Man page
|
| run,SqrtLassoSolver-method |
Man page
|
| run.BayesSpikeSolver |
Man page
|
| run.EnsembleSolver |
Man page
|
| run.LassoPVSolver |
Man page
|
| run.LassoSolver |
Man page
|
| run.PearsonSolver |
Man page
|
| run.RandomForestSolver |
Man page
|
| run.RidgeSolver |
Man page
|
| run.SpearmanSolver |
Man page
|
| run.SqrtLassoSolver |
Man page
|
| solve |
Man page
|
| solve,TReNA-method |
Man page
|
| solve.BayesSpike |
Man page
|
| solve.Ensemble |
Man page
|
| solve.Lasso |
Man page
|
| solve.LassoPV |
Man page
|
| solve.Pearson |
Man page
|
| solve.RandomForest |
Man page
|
| solve.Ridge |
Man page
|
| solve.Spearman |
Man page
|
| solve.SqrtLasso |
Man page
|
| solve.TReNA |
Man page
|
