API for TSCAN
Tools for Single-Cell Analysis
| Global functions | |
|---|---|
| .connect_cluster_mst | Source code |
| .create_cluster_mst | Source code |
| .create_mnn_distance_matrix | Source code |
| .entropic_loop | Source code |
| .estimate_edge_confidence | Source code |
| .forge_spline_basis_design | Source code |
| .map_cells_to_mst | Source code |
| .per_cell_entropy | Source code |
| .quick_pseudotime | Source code |
| .test_blocked_pseudotime | Source code |
| .test_pseudotime | Source code |
| .test_solo_pseudotime | Source code |
| TSCAN | Man page |
| TSCANorder | Man page Source code |
| TSCANui | Man page Source code |
| createClusterMST | Man page |
| createClusterMST,ANY-method | Man page |
| createClusterMST,SingleCellExperiment-method | Man page |
| createClusterMST,SummarizedExperiment-method | Man page |
| difftest | Man page Source code |
| exprmclust | Man page Source code |
| lpsdata | Man page |
| mapCellsToEdges | Man page |
| mapCellsToEdges,ANY-method | Man page |
| mapCellsToEdges,SingleCellExperiment-method | Man page |
| mapCellsToEdges,SummarizedExperiment-method | Man page |
| orderCells | Man page Source code |
| orderscore | Man page Source code |
| perCellEntropy | Man page |
| perCellEntropy,ANY-method | Man page |
| perCellEntropy,SummarizedExperiment-method | Man page |
| plotmclust | Man page Source code |
| preprocess | Man page Source code |
| quickPseudotime | Man page |
| quickPseudotime,ANY-method | Man page |
| quickPseudotime,SingleCellExperiment-method | Man page |
| quickPseudotime,SummarizedExperiment-method | Man page |
| reportEdges | Man page |
| reportEdges,ANY-method | Man page |
| reportEdges,SingleCellExperiment-method | Man page |
| reportEdges,SummarizedExperiment-method | Man page |
| rowmean | Man page Source code |
| singlegeneplot | Man page Source code |
| testPseudotime | Man page |
| testPseudotime,ANY-method | Man page |
| testPseudotime,SummarizedExperiment-method | Man page |
