Man pages for TSCAN
Tools for Single-Cell Analysis
| createClusterMST | Minimum spanning trees on cluster centroids |
| difftest | difftest |
| exprmclust | exprmclust |
| lpsdata | Sinlge-cell RNA-seq data for BMDC cells before and after LPS... |
| mapCellsToEdges | Map cells to edges |
| orderCells | Compute pseudotimes from the MST |
| orderscore | orderscore |
| perCellEntropy | Compute the per-cell entropy |
| plotmclust | plotmclust |
| preprocess | preprocess |
| quickPseudotime | Quick MST-based pseudotime |
| reportEdges | Report MST edge coordinates |
| rowmean | Compute column means of a matrix based on a grouping variable |
| singlegeneplot | singlegeneplot |
| testPseudotime | Test for differences along pseudotime |
| TSCAN | TSCAN: Tools for Single-Cell ANalysis |
| TSCANorder | TSCANorder |
| TSCANui | TSCANui |
