spdata: Genome statistical data from eukaryotes with complete genome

In TreeAndLeaf: An alternative to dendrogram visualization and insertion of multiple layers of information

Description

Data from NCBI Genome database showing statistical results for eukaryotes with complete genome sequenced. The list of organisms with complete genome is available on KEGG Organisms website and NCBI data was scraped using RCrawler package. Taxonomy ids were obtained using NCBI Tax Identifier.

Usage

data(spdata)

Format

An object of class "data.frame"

References

Genome - NCBI. Retrieved August 15, 2019 from https://www.ncbi.nlm.nih.gov/genome

Taxonomy - NCBI. Tax Identifier. Retrieved August 15, 2019 from https://www.ncbi.nlm.nih.gov/taxonomy

KEGG Organisms: Complete Genomes. Retrieved August 15, 2019 from https://www.genome.jp/kegg/catalog/org_list.html

Examples

data(spdata)
View(spdata)

TreeAndLeaf documentation built on Nov. 8, 2020, 4:51 p.m.