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VCFArray extends the DelayedArray to represent VCF data entries as array-like objects with on-disk / remote VCF file as backend. Data entries from VCF files, including info fields, FORMAT fields, and the fixed columns (REF, ALT, QUAL, FILTER) could be converted into VCFArray instances with different dimensions.
Package details |
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Author | Qian Liu [aut, cre], Martin Morgan [aut] |
Bioconductor views | DataRepresentation Infrastructure Sequencing VariantAnnotation |
Maintainer | Qian Liu <qliu7@buffalo.edu> |
License | GPL-3 |
Version | 1.6.0 |
URL | https://github.com/Liubuntu/VCFArray |
Package repository | View on Bioconductor |
Installation |
Install the latest version of this package by entering the following in R:
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