Man pages for XBSeq
Test for differential expression for RNA-seq data
| apaUsage | Testing differential alternative polyadenylation (apa) usage... |
| conditions | Accessor functions for the 'conditions' information in a... |
| counts | Accessor functions for the 'counts' information in a... |
| dispEst | Function to access the dispersion estimation for each gene |
| dispTable | Access the dispersion table information for a XBSeqDataSet... |
| estimateRealCount | Preliminary step to estimate the true signal based on... |
| estimateSCV | Estimate squared coefficient of variation for each gene |
| ExampleData | Example Datasets used in the manual pages as well as in... |
| fitInfo | Accessor function for the fitInfo objects in a XBSeqDataSet |
| getSignalVars | Estimate variance of the signal based on variance summation... |
| MAplot | Generate maplot after differential expression test |
| plotSCVEsts | Plot estimated squared coefficient of variation |
| XBplot | Examine the distribution of observed signal and background... |
| XBSeq | Express function to carry out XBSeq analysis |
| XBSeqDataSet-class | Class '"XBSeqDataSet"' |
| XBSeq-package | Differential expression analysis of RNA sequencing data by... |
| XBSeqTest | XBSeq test for differential expression |
