topTable-methods: Methods for topTable

Description Arguments Methods

Description

Methods for topTable. topTable extracts the top n most important features for a given classification or regression procedure

Arguments

fit

object resulting from a classification or regression procedure

n

number of features that one wants to extract from a table that ranks all features according to their importance in the classification or regression model; defaults to 10 for limma objects

Methods

glmnet

fit = "glmnet", n = "numeric"

glmnet objects are produced by lassoClass or lassoReg

limma

fit = "limma", n = "numeric"

limma objects are produced by limma2Groups

MarrayLM

fit = "limma", n = "numeric"

MarrayLM objects are produced by lmFit of the limma package

pamClass

fit = "pamClass", n = "numeric"

pamClass objects are produced by pamClass

rfClass

fit = "rfClass", n = "numeric"

rfClass objects are produced by rfClass

tTest

fit = "tTest", n = "numeric"

tTest objects are produced by tTest

fTest

fit = "fTest", n = "numeric"

fTest objects are produced by fTest


a4Base documentation built on May 2, 2018, 6:03 p.m.