probe2gene: Translate Affymetrix probeset IDs into gene symbols
In a4Base: Automated Affymetrix Array Analysis Base Package
Description
Usage
Arguments
Value
Author(s)
See Also
Examples
Description
Auxiliary function for (currently) spectralMap
allowing the conversion of Affy probeset IDs to gene symbols
Usage
1
probe2gene(probesetIds, chipPkg)
Arguments
probesetIds
Affymetrix probeset IDs
chipPkg
string indicating the annotation package for the chip
Value
Vector containing the respective gene symbols
Author(s)
Tobias Verbeke
See Also
spectralMap, lassoClass, ...
Examples
1
2
3
4
5
6
7
if (require(ALL)){
data(ALL, package = "ALL")
chip <- annotation(ALL)
chipAnnotationPkg <- paste(chip, "db", sep = ".")
res <- probe2gene(featureNames(ALL), chipAnnotationPkg)
head(res)
}
a4Base documentation built on Nov. 8, 2020, 5:41 p.m.
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Description Usage Arguments Value Author(s) See Also Examples
Description
Auxiliary function for (currently) spectralMap allowing the conversion of Affy probeset IDs to gene symbols
Usage
1 | probe2gene(probesetIds, chipPkg)
|
Arguments
probesetIds |
Affymetrix probeset IDs |
chipPkg |
string indicating the annotation package for the chip |
Value
Vector containing the respective gene symbols
Author(s)
Tobias Verbeke
See Also
spectralMap, lassoClass, ...
Examples
1 2 3 4 5 6 7 | if (require(ALL)){
data(ALL, package = "ALL")
chip <- annotation(ALL)
chipAnnotationPkg <- paste(chip, "db", sep = ".")
res <- probe2gene(featureNames(ALL), chipAnnotationPkg)
head(res)
}
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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