mergeSplitObjects: Merge a list of split objects

In affyPara: Parallelized preprocessing methods for Affymetrix Oligonucleotide Arrays

Description

Functions to merge or combine a list of split objects (AffyBatch, Matrix).

Usage

mergeAffyBatches(abatch.list, description = NULL, notes = character(0))
combineMatrices(matrix.list, verbose = getOption("verbose"))

Arguments

abatch.list	A list of objects of class AffyBatch.
description	A MIAME object.
notes	A character vector of explanatory text.
matrix.list	A list of objects of class matrix.
verbose	A logical value. If TRUE it writes out some messages.

Details

Functions to merge or combine a list of split objects.

mergeAffyBatches

Merges a list of AffyBatches to one AffyBatch.

combineMatrices

Combines a list of matrices by columns to one matrix.

Value

mergeAffyBatches	Returns ONE object of class AffyBatch.
combineMatrices	Returns ONE object of class matrix.

Author(s)

Markus Schmidberger [e-mail], Ulrich Mansmann [e-mail]

Examples

library(affyPara)
if (require(affydata)) {
  data(Dilution)

  #split AffyBatch
  abatch.list<- splitAffyBatch(Dilution, 2)

  #Merge AffyBatch
  AffyBatch <- mergeAffyBatches(abatch.list)

  # Create matrices
  a <- matrix(1:25, nrow=5)
  b <- matrix(101:125, nrow=5)
  matrix.list <- list(a,b)

  # Combine matrices
  combineMatrices(matrix.list)
}

affyPara documentation built on Nov. 8, 2020, 11:08 p.m.