buildAntiProfile-methods: Create an anti-profile from a AntiProfileStats object
In antiProfiles: Implementation of gene expression anti-profiles

Description Arguments Value Author(s) Examples

This function creates anti-profile using statistics stored in a AntiProfileStats object

`stats`	an object of class AntiProfileStats as produced by the apStats function
`tissueSpec`	use tissue-specific regions of normal expression
`tissueFilter`	use only tissue-specific genes in the anti-profile
`sigsize`	desired size of signature, if NULL, computed from statCutoff
`cutoff`	median absolute deviation multiplier used to define normal regions of expression
`statCutoff`	cutoff used to include probesets in anti-profile

an object of class AntiProfilesSig or AntiProfilesTissueSig depending on the tissueSpec argument

Hector Corrada Bravo hcorrada@gmail.com

if (require(antiProfilesData)) {
  # create an anti-profile, ignoring tissue-specificity of probesets, with 10 probesets
  data(apColonData)
  colonStats = apStats(exprs(apColonData), pData(apColonData)$Status)
  ap = buildAntiProfile(colonStats, tissueSpec=FALSE, sigsize=10)
}