artmsPhotonOutput: Generate PHOTON Input file

Description Usage Arguments Value Examples

View source: R/otherApps.R

Description

It takes as input the imputedL2fcExtended.txt results generated by the artmsAnalysisQuantifications() function and generates the PHOTON input file. Please, notice that the only species suported by PHOTON is humans.

Usage

1
artmsPhotonOutput(inputFile, output_dir = ".", verbose = TRUE)

Arguments

inputFile

(char) the imputedL2fcExtended.txt file name and location

output_dir

(char) Name of the folder to output results (Default: current. Recommended: "photon_input_files" or similar)

verbose

(logical) TRUE (default) to show function messages

Value

Multiple output files (inputs of phosfate)

Examples

1
2
3
4
## Not run: 
artmsPhotonOutput(inputFile)

## End(Not run)

artMS documentation built on April 14, 2021, 6 p.m.