bamsignals: Efficient counting of reads in a bam file

Description Author(s) See Also

Description

Functions and classes for extracting signals from a bam file. Differently than the other packages, this package is not supposed to import reads in R. All the read-processing is done in C/C++ and the only output are read counts.

Author(s)

Alessandro Mammana [email protected]

Johannes Helmuth [email protected]

See Also

bamsignals-methods for the functions and CountSignals for the class.


bamsignals documentation built on Nov. 1, 2018, 4:33 a.m.