bamsignals: Extract read count signals from bam files
Version 1.8.0

This package allows to efficiently obtain count vectors from indexed bam files. It counts the number of reads in given genomic ranges and it computes reads profiles and coverage profiles. It also handles paired-end data.

Package details

AuthorAlessandro Mammana [aut, cre], Johannes Helmuth [aut]
Bioconductor views Alignment Coverage DataImport Sequencing
MaintainerAlessandro Mammana <mammana@molgen.mpg.de>
LicenseGPL-2
Version1.8.0
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("bamsignals")

Try the bamsignals package in your browser

Any scripts or data that you put into this service are public.

bamsignals documentation built on May 31, 2017, 11:18 a.m.