Man pages for bumphunter
Bump Hunter

annotateNearestAnnotate the results of nearest
annotateTranscriptsAnnotate transcripts
clusterMakerMake clusters of genomic locations based on distance
dummyDataGenerate dummy data for use with bumphunter functions
getSegmentsSegment a vector into positive, zero, and negative regions
locfitByClusterApply local regression smoothing to values within each...
loessByClusterApply loess smoothing to values within each spatially-defined...
matchGenesFind and annotate closest genes to genomic regions
regionFinderFind non-zero regions in vector
runmedByClusterApply running median smoothing to values within each...
smootherSmooth genomic profiles
TTExample data
bumphunter documentation built on May 2, 2018, 4:40 a.m.