calm: Covariate Assisted Large-scale Multiple testing

Statistical methods for multiple testing with covariate information. Traditional multiple testing methods only consider a list of test statistics, such as p-values. Our methods incorporate the auxiliary information, such as the lengths of gene coding regions or the minor allele frequencies of SNPs, to improve power.

Package details

AuthorKun Liang [aut, cre]
Bioconductor views Bayesian DifferentialExpression GeneExpression Genetics ImmunoOncology Metabolomics Microarray MultipleComparison Proteomics RNASeq Regression Sequencing Transcriptomics
MaintainerKun Liang <>
LicenseGPL (>=2)
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))


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calm documentation built on Nov. 8, 2020, 5:33 p.m.