update_variables: Replaces new values with previous values of competing or...

In ceRNAnetsim: Regulation Simulator of Interaction between miRNA and Competing RNAs (ceRNA)

Description

This function replaces new values with previous values of competing or miRNA counts.

Usage

update_variables(input_graph, current_counts)

Arguments

input_graph	The processed graph object.
current_counts	The additional df that provided by user.

Details

update_variables function provides updating edge variables to current values. If the microRNA or competing expression (or both) change (decreasing or increasing), this function switches the values that are found in a new dataset provided by user. But the current value dataset must be equal with initial dataset in terms of node name.

Value

the graph object.

Examples

data('minsamp')
data('new_counts')

 minsamp%>%
 priming_graph(Competing_expression, miRNA_expression,
     aff_factor = c(seed_type,energy), deg_factor = region)%>%
   update_variables(new_counts)
   #new_counts includes the current counts of nodes.

ceRNAnetsim documentation built on Nov. 28, 2020, 2 a.m.