API for cellTree
Inference and visualisation of Single-Cell RNA-seq data as a hierarchical tree structure
| Global functions | |
|---|---|
| .assign.tree.data | Source code |
| .chi.square.dist | Source code |
| .compute.tree.layout | Source code |
| .find.start.group | Source code |
| .format.grouping | Source code |
| .library.or.stop | Source code |
| .merge.backbone.node.to | Source code |
| .mixrgb | Source code |
| .normalise.data | Source code |
| .pick.rooting.method | Source code |
| .plot.b.tree | Source code |
| .polynom.deriv.vals | Source code |
| .polynom.vals | Source code |
| .recur.merge.backbone | Source code |
| .recur.ordered.branch.table | Source code |
| .recur.ordered.branches | Source code |
| .recur.shorten.backbone | Source code |
| .recur.tree.layout | Source code |
| .sink.reset | Source code |
| HSMM_lda_model | Man page |
| cell.ordering.table | Man page Source code |
| cellTree | Man page |
| cellTree-package | Man page |
| compute.backbone.tree | Man page Source code |
| compute.go.enrichment | Man page Source code |
| compute.lda | Man page Source code |
| ct.plot.go.dag | Man page Source code |
| ct.plot.grouping | Man page Source code |
| ct.plot.heatmap | Man page Source code |
| ct.plot.topics | Man page Source code |
| get.cell.dists | Man page Source code |
| go.results.to.latex | Man page Source code |
| order.genes.by.fit | Source code |
| save.per.topic.gene.distribution | Source code |
