Files in chipseq
chipseq: A package for analyzing chipseq data

NAMESPACE
DESCRIPTION
TODO
src/rlesumprod.c
build/vignette.rds
data/cstest.rda
data/datalist
inst/doc/Workflow.pdf
inst/doc/Workflow.Rnw
inst/doc/Workflow.R inst/Scripts/ReadAndSaveData.R inst/Scripts/antibody_comparison.R
inst/Scripts/Islands.Rnw
inst/Scripts/PeaksByCopyNumber.Rnw
inst/Scripts/PeakContextHuman.Rnw
inst/Scripts/PairedEndComparison.Rnw
inst/Scripts/solexa54.R
inst/Scripts/AntibodyComparison.Rnw
inst/Scripts/RateComparison.Rnw
inst/Scripts/PeakCutoff.Rnw
inst/Scripts/CTCF_ERV.R inst/Scripts/poisson.R
inst/Scripts/PeakReproducibility.Rnw
inst/Scripts/fibroblasts.R inst/Scripts/estimate_fragment_size.R inst/Scripts/isochore_comparison.R
inst/Scripts/abc.rda
inst/Scripts/ReadAndSaveSimulation.R inst/Scripts/peakContext.R
inst/Scripts/PeakContextMouse.Rnw
inst/Scripts/ReadAndSaveCTCF.R inst/Scripts/peak_mle.R
inst/Scripts/CopyNumber.Rnw
inst/Scripts/diffpeak.R inst/Scripts/human-islands.R
inst/Scripts/singletons.Rnw
inst/Scripts/dePeaks.R inst/Scripts/CTCFBindingSites.R inst/Scripts/negbinomial.R inst/Scripts/SolexaSim.R inst/Scripts/diffpeaks.R inst/Scripts/ReadAndSave54.R
inst/Scripts/isochores.mm9.rda
inst/Scripts/getIsochores.R inst/Scripts/simulate.R
inst/Scripts/PeakModel.Rnw
inst/Scripts/MyoD.R inst/Scripts/hmm.R man/cstest.Rd man/chipseqFilter.Rd man/islandDepthPlot.Rd man/subsetSummary.Rd man/coverageplot.Rd man/laneSubsample.Rd man/peakSummary-methods.Rd man/peakCutoff.Rd man/estimate.mean.fraglen.Rd man/diffPeakSummary.Rd R/diffPeaks.R R/peaks.R R/subsets.R R/intersect.R R/plots.R R/fraglen.R R/filter.R R/context.R R/islands.R
vignettes/Workflow.Rnw
chipseq documentation built on Nov. 17, 2017, 1:47 p.m.