read.pedfile.map: function to read the accompanying map file of a LINKAGE ped...
In chopsticks: The 'snp.matrix' and 'X.snp.matrix' Classes
Description
Usage
Arguments
Details
Value
Note
Author(s)
References
See Also
View source: R/read.snps.pedfile.R
Description
This function read the accompanying map file of a LINKAGE ped file,
for the SNP names, position and chromosome.
Usage
1
Arguments
file
A Plink map file
Details
One such map file is the one accompanying the sample ped file of
Haploview.
Value
A data frame with columns "snp.names", "position", "chromosome".
Note
This is used internally by read.snps.pedfile
to read an accompanying map file.
Author(s)
Hin-Tak Leung htl10@users.sourceforge.net
References
See the documentation and description of ped files in
Haploview (http://www.broad.mit.edu/mpg/haploview/)
See Also
chopsticks documentation built on Nov. 8, 2020, 7:51 p.m.
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Description Usage Arguments Details Value Note Author(s) References See Also
View source: R/read.snps.pedfile.R
Description
This function read the accompanying map file of a LINKAGE ped file, for the SNP names, position and chromosome.
Usage
1 |
Arguments
file |
A Plink map file |
Details
One such map file is the one accompanying the sample ped file of Haploview.
Value
A data frame with columns "snp.names", "position", "chromosome".
Note
This is used internally by read.snps.pedfile
to read an accompanying map file.
Author(s)
Hin-Tak Leung htl10@users.sourceforge.net
References
See the documentation and description of ped files in Haploview (http://www.broad.mit.edu/mpg/haploview/)
See Also
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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