chromswitch
An R package to detect chromatin state switches from epigenomic data

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chromswitch: An R package to detect chromatin state switches from epigenomic data
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Man pages for chromswitch
An R package to detect chromatin state switches from epigenomic data

binarizePeaksbinarizePeaks
callBinarycallBinary
callSummarycallSummary
chromswitchchromswitch: An R package for detecting chromatin state...
classEntropyclassEntropy
clustercluster
clusterEntropyclusterEntropy
completenesscompleteness
conditionalClassEntropyclassEntropyGivenClusters
conditionalClusterEntropyclusterEntropyGivenClasses
coordToGRangescoordToGRanges
filterPeaksfilterPeaks
GRangesToCoordGRangesToCoord
H3K4me3H3K4me3 peak calls in a short region for six adult tissues
homogeneityhomogeneity
LocalPeaks-classLocalPeaks
makeBrowserCoordmakeBrowserCoord
NMINMI
normalizePeaksnormalizePeaks
pReciprocalOverlappReciprocalOverlap
puritypurity
readNarrowPeakreadNarrowPeak
reducePeaksreducePeaks
retrievePeaksretrievePeaks
summarizePeakssummarizePeaks
vMeasurevMeasure
winsorNormwinsorNorm
chromswitch documentation built on Nov. 8, 2020, 5:24 p.m.

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