Man pages for cleanUpdTSeq
This package classifies putative polyadenylation sites as true or false/internally oligodT primed
| BED2GRangesSeq | BED2GRangesSeq |
| buildClassifier | get Naive Bayes Classifier |
| buildFeatureVector | buildFeatureVector |
| classifier | An object of class "naiveBayes" generated from... |
| cleanUpdTSeq-package | This package classifies putative polyadenylation sites. |
| data.NaiveBayes | Training Data |
| featureVector-class | Class '"featureVector"' |
| getDownstreamSequence | getDownstreamSequence |
| getUpstreamSequence | Get upstream sequences of the putative pA site |
| modelInfo-class | Class '"modelInfo"' |
| naiveBayes | Class '"naiveBayes"' |
| PASclassifier-class | Class '"PASclassifier"' |
| predictTestSet | predictTestSet |
