PASclassifier-class: Class '"PASclassifier"'

In cleanUpdTSeq: This package classifies putative polyadenylation sites as true or false/internally oligodT primed

Description

An object of class "PASclassifier" represents the output of buildClassifier

Objects from the Class

Objects can be created by calls of the form new("PASclassifier", classifier, info).

Slots

classifier

Object of class "naiveBayes" The output of naiveBayes. An object of class "naiveBayes" including components:

apriori

Class distribution for the dependent variable.

tables

A list of tables, one for each predictor variable. For each categorical variable a table giving, for each attribute level, the conditional probabilities given the target class. For each numeric variable, a table giving, for each target class, mean and standard deviation of the (sub-)variable.

info

Object of class modelInfo

Methods

$, $<-

Get or set the slot of PASclassifier

Examples

data(classifier)
classifier$info$upstream
classifier$info$wordSize
classifier$info$alphabet

cleanUpdTSeq documentation built on Nov. 8, 2020, 8:30 p.m.