API for cliqueMS
Annotation of Isotopes, Adducts and Fragmentation Adducts for in-Source LC/MS Metabolomics Data
| Global functions | |
|---|---|
| addIso2peaklist | Source code |
| addIsoAnnotation | Source code |
| anClique | Man page Source code |
| anClique-class | Man page |
| checkadinfo | Source code |
| cliqueMS | Man page |
| cliqueMS-package | Man page |
| computeCliques | Man page Source code |
| computelistofIsoTable | Source code |
| correctGrade | Source code |
| createNetwork | Man page |
| createNetwork,XCMSnExp-method | Man page |
| createNetwork,xcmsSet-method | Man page |
| createanClique | Man page |
| createanClique,XCMSnExp-method | Man page |
| createanClique,xcmsSet-method | Man page |
| defineEIC | Source code |
| ex.cliqueGroups | Man page |
| filterCharge | Source code |
| filterFeatures | Source code |
| filterInlinks | Source code |
| filterIso | Source code |
| filterOutlinks | Source code |
| getAnnotation | Man page Source code |
| getCliques | Man page Source code |
| getIsoCharge | Source code |
| getIsolistanClique | Man page |
| getIsolistanClique,anClique-method | Man page |
| getIsolistanClique<- | Man page |
| getIsolistanClique<-,anClique-method | Man page |
| getIsotopes | Man page Source code |
| getNetanClique | Man page |
| getNetanClique,anClique-method | Man page |
| getNetanClique<- | Man page |
| getNetanClique<-,anClique-method | Man page |
| getPeaklistanClique | Man page |
| getPeaklistanClique,anClique-method | Man page |
| getPeaklistanClique<- | Man page |
| getPeaklistanClique<-,anClique-method | Man page |
| getlistofCliques | Man page |
| getlistofCliques,anClique-method | Man page |
| getlistofCliques<- | Man page |
| getlistofCliques<-,anClique-method | Man page |
| hasAnnotation | Man page |
| hasAnnotation,anClique-method | Man page |
| hasAnnotation<- | Man page |
| hasAnnotation<-,anClique-method | Man page |
| hasCliques | Man page |
| hasCliques,anClique-method | Man page |
| hasCliques<- | Man page |
| hasCliques<-,anClique-method | Man page |
| hasIsotopes | Man page |
| hasIsotopes,anClique-method | Man page |
| hasIsotopes<- | Man page |
| hasIsotopes<-,anClique-method | Man page |
| isoGrade | Source code |
| isonetAttributes | Source code |
| isotopeAnnotation | Source code |
| nato0 | Source code |
| negative.adinfo | Man page |
| positive.adinfo | Man page |
| returnAnnotation | Source code |
| returnCliques | Source code |
| returnIsotopes | Source code |
| show,anClique-method | Man page |
| similarFeatures | Source code |
| transformAnnotation | Source code |
| updateCliques | Source code |
