suggest_best_k-HierarchicalPartition-method: Guess the best number of partitions
In cola: A Framework for Consensus Partitioning
Description
Usage
Arguments
Details
Value
Author(s)
Examples
Description
Guess the best number of partitions
Usage
1
2
## S4 method for signature 'HierarchicalPartition'
suggest_best_k(object, jaccard_index_cutoff = 0.95)
Arguments
object
A HierarchicalPartition-class object.
jaccard_index_cutoff
The cutoff for Jaccard index for comparing to previous k.
Details
It basically gives the best k at each node.
Value
A data frame with the best k and other statistics for each node.
Author(s)
Zuguang Gu <z.gu@dkfz.de>
Examples
1
2
cola documentation built on Nov. 8, 2020, 8:12 p.m.
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Description Usage Arguments Details Value Author(s) Examples
Description
Guess the best number of partitions
Usage
1 2 | ## S4 method for signature 'HierarchicalPartition'
suggest_best_k(object, jaccard_index_cutoff = 0.95)
|
Arguments
object |
A |
jaccard_index_cutoff |
The cutoff for Jaccard index for comparing to previous k. |
Details
It basically gives the best k at each node.
Value
A data frame with the best k and other statistics for each node.
Author(s)
Zuguang Gu <z.gu@dkfz.de>
Examples
1 2 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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