Nothing
## ---- echo = FALSE, message = FALSE---------------------------------------------------------------
library(markdown)
library(knitr)
knitr::opts_chunk$set(
error = FALSE,
tidy = FALSE,
message = FALSE,
fig.align = "center")
options(width = 100)
options(rmarkdown.html_vignette.check_title = FALSE)
library(cola)
## ---- eval = FALSE--------------------------------------------------------------------------------
# # code only for demonstration
# mat = adjust_matrix(mat) # optional
# rl = run_all_consensus_partition_methods(mat, mc.cores = ...)
# cola_report(rl, output_dir = ..., mc.cores = ...)
## ---- eval = FALSE--------------------------------------------------------------------------------
# res = consensus_partition(mat, top_value_method = ..., partition_method = ...)
# cola_report(res, output_dir = ..., mc.cores = ...)
## ---- eval = FALSE--------------------------------------------------------------------------------
# res = consensus_partition_by_down_sampling(mat, subset = ...,
# top_value_method = ..., partition_method = ...)
# cola_report(res, output_dir = ..., mc.cores = ...)
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