Files in compartmap

A/B compartment inference from ATAC-seq and methylation array data

NEWS.md README.md

.Rinstignore

NAMESPACE

DESCRIPTION

LICENSE

build/vignette.rds

data/meth_array_450k_chr14.rda

data/datalist

data/bulkATAC_raw_filtered_chr14.rda

R/getABSignal.R R/plotAB.R R/getArrayABsignal.R R/getCorMatrix.R R/getCompartments.R R/granges.R R/fisherTransform.R R/getATACABsignal.R R/getBinMatrix.R vignettes/compartmap_vignette.Rmd man/getATACABsignal.Rd man/getBinMatrix.Rd man/getCompartments.Rd man/fisherZ.Rd man/ifisherZ.Rd man/getArrayABsignal.Rd man/getCorMatrix.Rd man/plotAB.Rd man/getABSignal.Rd man/filtered.data.chr14.Rd man/array.data.chr14.Rd

inst/NEWS

inst/doc/compartmap_vignette.html

inst/doc/ATAC_supervised_UMAP.png

inst/doc/compartmap_vignette.Rmd

inst/doc/chr1_AB_compartments.png

inst/doc/compartmap_vignette.R

compartmap documentation built on Nov. 8, 2020, 5:34 p.m.