Man pages for copa
Functions to perform cancer outlier profile analysis.
| copa | Calculate COPA Scores from a Set of Microarrays |
| copaFilter | Pre-filter Genes for COPA Analysis |
| copa.package | copa - A package to compute 'Cancer Outlier Profile Analysis' |
| copaPerm | Measure Significance of COPA by Permutation |
| copaTable | Summarize copa results |
| getans | Interactive Function |
| perm.mat | Produce a Matrix of Permuted Classlabels |
| plotCopa | Plot Gene Pairs fom the Results of Running copa |
| pSum | Compute all pairwise sums |
| scatterPlotCopa | Create scatterplots of interesting gene pairs |
| summaryCopa | Create Summary Showing Top Gene Pairs |
