copa.package: copa - A package to compute 'Cancer Outlier Profile Analysis'
In copa: Functions to perform cancer outlier profile analysis.
Description
Details
Author(s)
References
Description
This package is used to compute copa scores, p-values based on
permutation, and plots of paired genes.
Details
Package: copa
Type: Package
Version: 1.1.2
Date: 2006-01-26
License: Artistic
There are two main functions; copa, which is used to compute the COPA
score for a set of microarrays, and permCopa, which is used to
calculate permutation based p-values and estimate false discovery rate (FDR).
Author(s)
James W. MacDonald
Maintainer: James W. MacDonald <jmacdon@u.washington.edu>
References
Tomlins, SA, et al. Recurrent fusion of TMPRSS2 and ETS transcription
factor genes in prostate cancer.
Science. 2005 Oct 28;310(5748):644-8.
copa documentation built on Nov. 8, 2020, 7:47 p.m.
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Description Details Author(s) References
Description
This package is used to compute copa scores, p-values based on permutation, and plots of paired genes.
Details
| Package: | copa |
| Type: | Package |
| Version: | 1.1.2 |
| Date: | 2006-01-26 |
| License: | Artistic |
There are two main functions; copa, which is used to compute the COPA
score for a set of microarrays, and permCopa, which is used to
calculate permutation based p-values and estimate false discovery rate (FDR).
Author(s)
James W. MacDonald
Maintainer: James W. MacDonald <jmacdon@u.washington.edu>
References
Tomlins, SA, et al. Recurrent fusion of TMPRSS2 and ETS transcription factor genes in prostate cancer. Science. 2005 Oct 28;310(5748):644-8.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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